Prosodic Reflexes in Mabalay Atayal - M.A. thesis (National Tsing Hua University, 1999) by Wendy Mae Lambert tying epenthesis, metathesis and vowel-glide alternations together as prosodic reflexes predominantly of footing constraints. Uses optimality theory to see effects of integrated proso - http://roa.rutgers.edu/files/342-0999/roa-342-lambert-4.pdf
Negation in Atayal and Mandarin - A comparison of Atayal and Mandarin arguing that the semantics of negation are similar in each language and where different, they tend to be associated with the semantics of individual terms, not negation itself. - http://www.ruf.rice.edu/~pwd/atayalnegation.pdf