Los Alamos: Kannon Zendo
- An affiliate of the Hidden Mountain Zen Center. Follows the same practice protocols as observed in the centers of its parent lineage, the Zen Center of Los Angeles and Zen Mountain Monastery.
- http://www.kannonzendo.org/

Zen Centers in New Mexico
- Complete list of all Zen centers in New Mexico maintained by the International Research Institute for Zen Buddhism.
- http://iriz.hanazono.ac.jp/zen_centers/centers_data/usaNW.htm#NEW%20MEXICO

Las Cruces: Zen Center of Las Cruces
- Services provided by Rev. Harvey Sodaiho Hilbert, a Zen Priest in the lineage of McGuire-Roshi. Affiliated with Daibutsuji Zen Temple, Soto lineage.
- http://www.zencenteroflascruces.org/

Albuquerque Zen Center
- Affiliated with Rinzai-ji. Offers weekly zazen practice and monthly all-day sittings.
- http://www.azc.org/

Cloudcroft: Dharma Mountain Zendo
- Retreat center for Daibutsuji Temple. Offers monthly sesshin. Soto lineage.
- http://www.pvtnetworks.net/~kmcguire/frames.html

Sante Fe: Upaya Peace Institute
- Zen Peacemaker Community lead by Joan Halifax Roshi. Offers daily zazen practice and a large schedule of retreats in the Soto tradition.
- http://www.upaya.org/

Jemez Springs: Bodhi Manda Zen Center
- Rinzai Zen practice center created in 1973 by Kyozan Joshu Roshi. Offers a full residential practice program.
- http://www.bmzc.org/