The Whole Brain Atlas - Excellent MRI views of the normal and diseased human brain. Collaboration of MIT and Harvard Univ. - http://www.med.harvard.edu/AANLIB/
Brain Pictures - A set slices from an NMR brain scan, displayed using Javascript so that the user can view them in series by moving the mouse pointer. Non-scientific. - http://www.mabot.com/brain/
Comparative Mammalian Brain Collections - Univ. of Wisconsin site has images showing the brain's internal architecture of specimens from over 100 mammalian species for studying differences in brain function and evolution. - http://www.brainmuseum.org/
Flybrain - An online atlas and database of the Drosophila nervous system. - http://flybrain.neurobio.arizona.edu/
UCLA Laboratory of NeuroImaging - Research on brain mapping, structure and function, and related imaging technologies. - http://www.loni.ucla.edu/