AutoPrime
- Automates generation of primers for RT-PCR experiments by combining the information from sequence databases with primer design software.
- http://www.autoprime.de

In silico PCR
- Tools to derive the theoretical results from many PCR techniques and techniques related to PCR, from the Department of Immunology, Microbiology and Parasitology, Faculty of Pharmacy at the University of the Basque Country, Spain.
- http://insilico.ehu.es/PCR/

Software for Amplified Fragment Length
- Article by Maurisa Riley and ChangSheng Jonathan Liu at SoftGenetics, LLC, State College, PA, USA.
- http://www.softgenetics.com/papers/AFLP%20Application%20Note.pdf

TGGE-STAR
- A program to optimize temperature gradient gel electrophoresis and PCR for mutation screening, From the Institute for Medical Genetics, Charite, Berlin, Germany.
- http://www.charite.de/bioinf/tgge/

Electronic PCR
- A program that checks sequence(s) submitted by the visitor against known sequences. Program set up and run by the National Institutes of Health (NIH), Bethesda, Maryland, USA.
- http://www.ncbi.nih.gov/genome/sts/epcr.cgi/

Primer3
- Program to pick primers from a DNA sequence, from the Whitehead Institute for Biomedical Research, Cambridge, MD, USA..
- http://www.broad.mit.edu/cgi-bin/primer/primer3_www.cgi

Comet Assay
- An advanced image analysis system for the quantification of DNA damage in cells using the Comet single cell gel electrophoresis technique, from Perceptive Instruments Ltd., Haverhill, Suffolk, UK.
- http://www.perceptive.co.uk/applications/comet.htm

PCR Box Titration Calculator
- JavaScript program calculates the amounts of ingredients needed to do two-dimensional box titrations of various reactants in polmerase chain reactions.
- http://www.attotron.com/pub/pcrtitr.htm